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      Scripps Research from page 20                      activated solely in the liver, only secreted proteins related      “The discovery of
                                                         to that organ system were highlighted – displaying the high   these neurons suggests
      communication                                      specificity of the model as well.                 for the first time that
      with each other.                                      “Given the central role of key secreted proteins such as   your brain is actively
      During exercise, for                               insulin, there is a great deal of interest in identifying novel   surveying your fat,
      example, muscles                                   secreted proteins,” said Andrew McMahon, Ph.D., senior   rather than just passively
      send out signals to                                author of the study and chair of the Department of Stem   receiving messages
      fat and liver tissue to                            Cell Biology and Regenerative Medicine at the University   about it,” says co-senior
      release their energy                               of Southern California. “Genome studies are suggesting   author Li Ye, Ph.D.,
      sources. While these                               that many new proteins remain to be characterized. We’re   the Abide-Vividion
      communication                                      looking forward to a deep dive into this area now that we   Chair in Chemistry and
      networks play a                                    have validated the technology.”                   Chemical Biology and
      critical role in our                                  There are countless research applications for this   an associate professor
      bodies every day, it  A novel mouse model for mapping   technology, Droujinine notes. With this type of model,   of neuroscience at Scripps Research. “The implications of
      has been historically  protein communication between   scientists can start to map unexplored disease pathways and   this finding are profound.”
      difficult to uncover  organs. Proteins are labeled by   ultimately develop targeted treatments, as many diseases      “This is yet another example of how important sensory
      su c h  p a t h wa ys.  biotin and their movement in the   originate in a single organ and then eventually spread   neurons are to health and disease in the human body,” says
      Scientists at Scripps  body can be tracked. Photo credit –   to others. Cancer, with its metastatic properties, is one   co-senior author and professor Ardem Patapoutian, Ph.D.,
      Research, University  Scripps Research and University of   example. For another, studies have shown that many of the   who is also a Nobel laureate and a Howard Hughes Medical
      of Sout he rn  Southern California.                health complications that arise from obesity could be due   Institute investigator.
      Ca l i forni a  a nd                               to faulty organ communication, yet many of the molecular      In mammals, adipose tissue stores energy in the form of
      elsewhere have now successfully created a model to label   mechanisms remain unknown.                fat cells and, when the body needs energy, releases those
      and track the protein signals that enable organ-to-organ      “Any protein we discover that plays a role in disease has the   stores. It also controls a host of hormones and signaling
      communication.                                     potential to be translated into a therapeutic,” adds Droujinine.  molecules related to hunger and metabolism. In diseases
         As the researchers described in Open Biology on Aug. 10,      In addition to Droujinine and McMahon, authors of the   including diabetes, fatty liver disease, atherosclerosis and
      their new mouse model marks the proteins that a cell secretes   study, A genetic model for in vivo proximity labelling of the   obesity, that energy storage and signaling often goes awry.
      and tracks their movement throughout the body. This novel   mammalian secretome, include Rui Yang, Amanda S. Meyer,      Researchers have long known that nerves extend into
      technology could shape our molecular understanding of   Jinjin Guo, Jill A. McMahon of the University of Southern   adipose tissue, but suspected they weren’t sensory neurons
      healthy versus diseased tissue, as well as the role that inter-  California (USC); Namrata D. Udeshi, Dominique K. Carey,   that carry data to the brain. Instead, most hypothesized that
      organ communication plays in disease onset and progression.  Charles Xu and Steven A. Carr of Broad Institute of Harvard   the nerves in fat belonged mostly to the sympathetic nervous
         “This new model can be likened to establishing a   and MIT; Yanhui Hu, David Rocco and Norbert Perrimon   system – the network responsible for our fight-or-flight
      passport system in the body, as we are identifying where   of Harvard Medical School; Qiao Fang of University of   response, which switches on fat-burning pathways during
      proteins are coming from and where they’re going,” says   Toronto; Jihui Sha and James Wohlschlege of UCLA;   times of stress and physical activity. Attempts to clarify the
      study co-first author Ilia Droujinine, Ph.D., Scripps fellow   Shishang Qin of Peking University; and Alice Y. Ting of   types and functions of these neurons have been difficult;
      and principial investigator in the Department of Molecular   Chan Zuckerberg Biohub.                 methods used to study neurons closer to the surface of the
      Medicine at Scripps Research. “We can finally bring these      This work was supported by a NIH Transformative R01   body or in the brain don’t work well deep in adipose tissue,
      interconnected communications networks to light, and then   grant 5R01DK121409 to A.P.M., A.Y.T., S.A.C. and N.P.,   where nerves are hard to see or to stimulate.
      develop treatments based on this new knowledge.”   and HHMI funding to N.P. I.A.D. acknowledges support      Ye and colleagues developed two new methods that
         Researchers have used other methods, such as viral   from the Ellen Browning Scripps Foundation.  enable them to overcome these challenges. First, an
      approaches, to understand protein secretion and the ways                                             imaging approach called HYBRiD turned mouse tissues
      that organs communicate with each other. While these   Scripps Research                              transparent and allowed the team to better track the
      techniques  have provided  invaluable  insight  into  the                                            paths of neurons as they snaked into adipose tissue. The
      proteins expressed in an organism, they aren’t sensitive   Scientists Eavesdrop On                   researchers discovered that nearly half of these neurons
      enough to label low-abundance proteins, or the origin                                                didn’t connect to the sympathetic nervous system, but
      and ultimate destination of protein interactions. But with  Communication Between Fat                instead to dorsal root ganglia – an area of the brain where
      this new model, scientists are now able to understand the   And Brain                                all sensory neurons originate.
      exact path a particular protein takes.                                                                  To better probe the role of these neurons in adipose tissue,
         In the study, the researchers used an enzyme called                                               the group turned to a second new technique, which they
      BirA*G3, which labels secreted proteins with a biotin      Newly discovered sensory neurons send messages from   named ROOT, for “retrograde vector optimized for organ
      tag. These biotin labels were then detected in live mice   fat tissue to the brain and could eventually be co-opted to   tracing”. ROOT let them selectively destroy small subsets of
      using a method called quantitative mass spectrometry   treat obesity or metabolic disease.           sensory neurons in the adipose tissue using a targeted virus
      proteomics, which is used to measure proteins in a sample.      What did the fat say to the brain? For years, it was   and then observe what happened.
      This revealed where the proteins originated from and   assumed that hormones passively floating through the blood      “This research was really made possible by the way these
      where they traveled to in the body.                were the way that a person’s fat – called adipose tissue –   new methods came together,” says Yu Wang, a graduate
         When BirA*G3 was broadly activated throughout the   could send information related to stress and metabolism to the   student in both the Ye and Patapoutian labs and first author
      body, the researchers found that all secreted proteins were   brain. Now, Scripps Research scientists report in Nature that   of the new paper. “When we first started this project, there
      successfully labeled, even low-abundance proteins with   newly identified sensory neurons carry a stream of messages   weren’t existing tools to answer these questions.”
      hormone-like properties. Likewise, when BirA*G3 was   from adipose tissue to the brain.                 The experiments revealed that when the brain doesn’t
                                                                                                           receive sensory messages from adipose tissue, programs
                                                                                                           triggered by the sympathetic nervous system – related to
                                                                                                           the conversion of white fat to brown fat – become overly
                                                                                                           active in fat cells, resulting in a larger than normal fat pad
                                                                                                           with especially high levels of brown fat, which breaks down
                                                                                                           other fat and sugar molecules to produce heat. Indeed, the
                                                                                                           animals with blocked sensory neurons – and high levels of
                                                                                                           sympathetic signaling – had increased body temperatures.
                                                                                                              The findings suggest that the sensory neurons and
                                                                                                           sympathetic neurons might have two opposing functions,
                                                                                                           with sympathetic neurons needed to turn on fat burning and
                                                                                                           the production of brown fat, and sensory neurons required
                                                                                                           to turn these programs down.
                                                                                                              “This tells us that there’s not just a one-size-fits-all
                                                                                                           instruction that brain sends adipose tissue,” says Li. “It’s
                                                                                                           more nuanced than that; these two types of neurons are acting
                                                                                                           like a gas pedal and a brake for burning fat.”
                                                                                                              The team doesn’t yet know exactly what messages the
                                                                                                           sensory neurons convey to the brain from adipose tissue,
                                                                                                           only that the connections and communications are key for
                                                                                                           keeping fat healthy. They are planning future research into
                                                                                                           what the neurons are sensing and whether other similar cells
                                                                                                           exist in additional internal organs.
                                                                                                              Other authors of the paper, The role of somatosensory
                                                                                                           innervation of adipose tissue, were Yu Wang, Verina Leung,
                                                                                                           Yunxiao Zhang, Victoria S. Nudell, Meaghan Loud, M. Rocio
                                                                                                           Servin-Vences, Dong Yang and Kristina Wang of Scripps
                                                                                                           Research; and Maria Dolores Moya-Garzon, Veronica L. Li,
                                                                                                           and Jonathan Z. Long of Stanford University.
                                                                                                              Funding was provided by the Howard Hughes Medical
                                                                                                           Institute, the National Institutes of Health (R35 NS105067,
                                                                                                           NIH Director’s New Innovator Award DP2DK128800,
                                                                                                           NIDDK K01DK114165), the Whitehall Foundation, the
                                                                                                           Baxter Foundation, a Helen Dorris Scholars fellowship,
                                                                                                           a Damon Runyon Cancer Research Foundation Merck
                                                                                                           fellowship (DRG-2405-20), and a Fundacion Alfonso Martin
                                                                                                           Escudero postdoctoral fellowship.
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